A categorical, higher dimensional algebra and generalized topos framework for Łukasiewicz–Moisil Algebraic–Logic models of non-linear dynamics in complex functional genomes and cell interactomes is proposed. Łukasiewicz–Moisil Algebraic–Logic models of neural, genetic and neoplastic cell networks, as well as signaling pathways in cells are formulated in terms of non-linear dynamic systems with n-state components that allow for the generalization of previous logical models of both genetic activities and neural networks. An algebraic formulation of variable ‘next-state functions’ is extended to a Łukasiewicz–Moisil (...) Topos with an n-valued Łukasiewicz–Moisil Algebraic Logic subobject classifier description that represents non-random and non-linear network activities as well as their transformations in developmental processes and carcinogenesis. The unification of the theories of organismic sets, molecular sets and Robert Rosen’s (M,R)-systems is also considered here in terms of natural transformations of organismal structures which generate higher dimensional algebras based on consistent axioms, thus avoiding well known logical paradoxes occurring with sets. Quantum bionetworks, such as quantum neural nets and quantum genetic networks, are also discussed and their underlying, non-commutative quantum logics are considered in the context of an emerging Quantum Relational Biology. (shrink)

Building on the advances made by feminist reconsiderations of methods, methodology and epistemology, this paper calls for an alliance between feminist social science and the emerging field of queer theory. By challenging traditional scientific approaches to research on sexual minority groups, a distinctly 'queer' approach is advocated that adopts a reflexive position on subjectivity and sexuality. While essentialist approaches privilege gay/lesbian, man/woman, and object/subject, this approach advances a framework of critical sexualities that moves social science into an arena of inclusivity (...) and multiple identities, rather than reductionistic categorical thought. The implications are clear: a rethinking of identity categories that transcend stagnant dualisms. (shrink)

Building on the advances made by feminist reconsiderations of methods, methodology and epistemology, this paper calls for an alliance between feminist social science and the emerging field of queer theory. By challenging traditional scientific approaches to research on sexual minority groups, a distinctly ‘queer’ approach is advocated that adopts a reflexive position on subjectivity and sexuality. While essentialist approaches privilege gay/lesbian, man/woman, and object/subject, this approach advances a framework of critical sexualities that moves social science into an arena of inclusivity (...) and multiple identities, rather than reductionistic categorical thought. The implications are clear: a rethinking of identity categories that transcend stagnant dualisms. (shrink)

An overview of the following three related papers in this issue presents the Emergence of Highly Complex Systems such as living organisms, man, society and the human mind from the viewpoint of the current Ontological Theory of Levels. The ontology of spacetime structures in the Universe is discussed beginning with the quantum level; then, the striking emergence of the higher levels of reality is examined from a categorical—relational and logical viewpoint. The ontological problems and methodology aspects discussed in the first (...) two papers are followed by a rigorous paper based on Category Theory, Algebraic Topology and Logic that provides a conceptual and mathematical basis for a Categorical Ontology Theory of Levels. The essential links and relationships between the following three papers of this issue are pointed out, and further possible developments are being considered. (shrink)

Women constitute the majority of both the leadership and the membership of local toxic waste activist organizations; yet, gender and the fight against toxic hazards are rarely analyzed together in studies on gender or on environmental issues. This absence of rigorous analysis of gender issues in toxic waste activism is particularly noticeable since many scholars already make note that women predominate in this movement. This article is an attempt to understand how women activists transcend private pain, fear, and disempowerment and (...) become powerful forces for change by organizing against toxic waste in their communities. This article systematically looks at these connections by examining data from survey research and case studies. The authors are particularly interested in the transformation of self of these women, with an emphasis on “ways of knowing.” They also examine the potential of existing social movement theories to explain women's activism against toxic waste. (shrink)

A novel conceptual framework is introduced for the Complexity Levels Theory in a Categorical Ontology of Space and Time. This conceptual and formal construction is intended for ontological studies of Emergent Biosystems, Super-complex Dynamics, Evolution and Human Consciousness. A claim is defended concerning the universal representation of an item’s essence in categorical terms. As an essential example, relational structures of living organisms are well represented by applying the important categorical concept of natural transformations to biomolecular reactions and relational structures that (...) emerge from the latter in living systems. Thus, several relational theories of living systems can be represented by natural transformations of organismic, relational structures. The ascent of man and other living organisms through adaptation, is viewed in novel categorical terms, such as variable biogroupoid representations of evolving species. Such precise but flexible evolutionary concepts will allow the further development of the unifying theme of local-to-global approaches to highly complex systems in order to represent novel patterns of relations that emerge in super- and ultra-complex systems in terms of compositions of local procedures. Solutions to such local-to-global problems in highly complex systems with ‘broken symmetry’ might be possible to be reached with the help of higher homotopy theorems in algebraic topology such as the generalized van Kampen theorems (HHvKT). Categories of many-valued, Łukasiewicz-Moisil (LM) logic algebras provide useful concepts for representing the intrinsic dynamic ‘asymmetry’ of genetic networks in organismic development and evolution, as well as to derive novel results for (non-commutative) Quantum Logics. Furthermore, as recently pointed out by Baianu and Poli (Theory and applications of ontology, vol 1. Springer, Berlin, in press), LM-logic algebras may also provide the appropriate framework for future developments of the ontological theory of levels with its complex/entangled/intertwined ramifications in psychology, sociology and ecology. As shown in the preceding two papers in this issue, a paradigm shift towards non-commutative, or non-Abelian, theories of highly complex dynamics—which is presently unfolding in physics, mathematics, life and cognitive sciences—may be implemented through realizations of higher dimensional algebras in neurosciences and psychology, as well as in human genomics, bioinformatics and interactomics. (shrink)

An overview of the following three related papers in this issue presents the Emergence of Highly Complex Systems such as living organisms, man, society and the human mind from the viewpoint of the current Ontological Theory of Levels. The ontology of spacetime structures in the Universe is discussed beginning with the quantum level; then, the striking emergence of the higher levels of reality is examined from a categorical—relational and logical viewpoint. The ontological problems and methodology aspects discussed in the first (...) two papers are followed by a rigorous paper based on Category Theory, Algebraic Topology and Logic that provides a conceptual and mathematical basis for a Categorical Ontology Theory of Levels. The essential links and relationships between the following three papers of this issue are pointed out, and further possible developments are being considered. (shrink)

The practice of a priori conceptual analysis requires that the concept being analyzed be available in the analyst's mind. The difficulties of analysis and the existence of disagreements among analysts are explained by distinguishing the implicit knowledge we have of these concepts from the explicit knowledge we seek. This view of disagreement assumes that those who disagree are typically attempting to analyze a single shared concept. In this paper, reasons are developed for replacing this guiding assumption with the alternative assumption (...) that members of a conceptual community often have similar, but not identical, concepts. Adopting this alternative requires that we rethink the nature and aims of conceptual analysis. (shrink)

: This paper is a response to Siegel 2004. I take Siegel's remarks as a basis for clarifying, defending, and further developing my account of the role of judgment in a theory of rationality.

This book develops an explanation for the roles of observation and theory in scientific endeavor that occupies the middle ground between empiricism and rationalism, and captures the strengths of both approaches. Brown argues that philosophical theories have the same epistemological status as scientific theories and constructs an epistemological theory that provides an account of the role that theory and instruments play in scientific observation. His theory of perception yields a new analysis of objectivity that combines the traditional view of (...) observation as the foundation of scientific objectivity with the contemporary recognition that observation is theory-dependent. (shrink)

Professor Brown describes and criticises the major classical model of rationality and offers a new model of this central concept in the history of philosophy and of science.

" --Maurice A. Finocchiaro,Isis "The best and most original aspect of the book is its overall conception.

In recent years empiricism has been under persistent attack, and serious questions have been raised about the ability of empiricism to provide the basis for a viable philosophy of science. The attack has been sufficiently vigorous, and in some quarters sufficiently successful, that many now maintain that empiricism is dead. My aim in this paper is to argue that, rather than being ready for embalmment and emplacement in the museum of philosophic oddities, empiricism is very much alive, and the central (...) thesis of empiricism remains the cornerstone for any viable philosophy of science. This is not to say that the recent attacks on empiricism have been without a point, rather, they have put anyone who would defend empiricism in the position of having to rethink many datails of the empiricist viewpoint. But it is the details, the way in which empiricism has been elaborated by its proponents, not the central empiricist insight, that must be reconsidered. (shrink)

Philosophy of science is still, in the minds of many, identified with positivism. This is understandable since twentieth century philosophy of science originates with the work of the Vienna Circle. Positivism is most famous for the verification theory of meaning, the doctrine that the meaning of any proposition is the method by which it is verified, and that any nonanalytic locution which cannot be proven or disproven by some empirical test has no cognitive significance. Positivism is an attempt to construct (...) a “scientific philosophy” in the worst sense: it is maintained that (with the exception of propositions which are analytic and thus vacuous) only those propositions which occur in the sciences are meaningful, all other discourse having at best some emotive value, but no cognitive content, and all of this is maintained within the confines of an exceedingly narrow notion of scientific knowledge. This notion is so narrow that its advocates found themselves in danger of having to relegate most of physics to the realm of nonsense since physics contains many statements which are strictly universal and thus cannot be conclusively verified. (shrink)

The novel has always provided a vehicle for commenting on various aspects of human existence. We are familiar with the political novel, the historical novel, or the metaphysical novel, and in this sense Sorrentino's Mulligan Stew, with its running commentary on novels, novelists, critics and publishers, may be viewed as a critical novel. A critical novel, however, has a striking feature which it does not share with the other sorts of novels mentioned above in that a critical novel is itself (...) a novel, and a member of the class of objects on which it is commenting. This is a structure that logicians call “self-reference” and the phenomenon of self-reference has provided a central theme in twentieth century logic and philosophy. (shrink)

“There is, in addition, a second reason for doubting that scientists reject paradigms because confronted with anomalies or counterinstances. In developing it my argument will itself foreshadow another of this essay's main theses. The reasons for doubt sketched above were purely factual; they were, that is, themselves counterinstances to a prevalent epistemological theory. As such, if my present point is correct, they can at best help to create a crisis or, more accurately, to reinforce one that is already very much (...) in existence. By themselves they cannot and will not falsify that philosophical theory, for its defenders will do what we have already seen scientists doing when confronted by anomaly. They will devise numerous articulations and ad hoc modifications of their theory in order to eliminate any apparent conflict. Many of the relevant modifications and qualifications are, in fact, already in the literature. If, therefore, these epistemological counterinstances are to constitute more than a minor irritant, that will be because they help to permit the emergence of a new and different analysis of science within which they are no longer a source of trouble. Furthermore, if a typical pattern, which we shall later observe in scientific revolutions, is applicable here, these anomalies will then no longer seem to be simply facts. From within a new theory of scientific knowledge, they may instead seem very much like tautologies, statements of situations that could not conceivably have been otherwise.”. (shrink)

The thesis that certain competing scientific theories are incommensurable was introduced by Kuhn and Feyerabend in 1962 and has been a subject of widespread critique. Critics have generally taken incommensurable theories to be theories which cannot be compared in a rational manner, but both Kuhn and Feyerabend have explicitly rejected this interpretation, and Feyerabend has discussed ways in which such comparisons can be made in a number of his writings. This paper attempts to clarify the incommensurability thesis through the examination (...) of a number of examples, both scientific and nonscientific, of cases in which incommensurable points of view compete. There follows a discussion of Kuhn's analogy between paradigm change and gestalt shifts, the ways in which incommensurable theories can be compared, and one key reason why the incommensurability thesis has been so often misinterpreted by its critics. (shrink)

Scientific theories are analyzed in terms of the role that they play in science rather than in terms of their logical structure. It is maintained that theories: provide descriptions of the fundamental features of their domains; on the basis of 1, explain non-fundamental features of their domains; provide a guide for further research in their domains. Any set of propositions that carries out these functions with respect to some domain counts as a theory. This view of theories is developed and (...) defended, and provides the basis for reconsidering a number of issues in the philisophy of science. It is argued that theories need not be unrestrictedly universal with respect to space and time; that the distinction between observable and theoretical entities fails because observables do function as theoretical entities in scientific theories, that there is no genuine philosophical problem of reduction; that the notion of "levels" can be replaced by the notion of "domains"; and that theories are the basic unit of scientific knowledge. (shrink)

In his later writings Kuhn reconsidered his earlier account of incommensurability, clarifying some aspects, modifying others, and explicitly rejecting some of his earlier claims. In Kuhn’s new account incommensurability does not pose a problem for the rational evaluation of competing scientific theories, but does pose a problem for certain forms of realism. Kuhn maintains that, because of incommensurability, the notion that science might seek to learn the nature of things as they are in themselves is incoherent. I develop Kuhn’s new (...) account of incommensurability, respond to his anti-realist argument, and sketch a form of realism in which the realist aim is a pursuable goal.Keywords: Incommensurability; Thomas Kuhn; Rationality; Skill; Theory choice; Translation. (shrink)

New concepts are constantly being introduced into our thinking. Conceptual Systems explores how these new concepts are entered into our systems along with sufficient continuity with older ideas to ensure understanding. The encyclopaedic breadth of this text highlights the many different aspects and disciplines that together present an insightful view into the various theories of concepts. Harold Brown, a reputable author in the philosophy of science examines several historically influential theories of concepts as well as providing a clear view (...) on the general theory of conceptual change. Interesting case studies examine examples of conceptual change in the history of physics including the move in seventeenth century physics from Galileo to Descates to Newton; and the conceptual framework of the "standard model" in the late twentieth century high- energy physics. The key central themes in the philosophy of science that are explored in- depth in this enormous book make it an essential read for academics in this field. (shrink)

The thesis of this paper is that philosophers are often too hasty in rejecting justifications because the argument that yields the justification is circular. Circularity is distinguished from vicious circularity and several examples are examined in which a proposed justification is circular in a precise sense, but not viciously circular. These include an observational procedure which could yield a velocity in excess of the velocity of light even though the impossibility of such velocities is assumed at a key step in (...) analyzing the data, and an argument that uses a specific argument form to show that that form is invalid. (shrink)

A novel conceptual framework is introduced for the Complexity Levels Theory in a Categorical Ontology of Space and Time. This conceptual and formal construction is intended for ontological studies of Emergent Biosystems, Super-complex Dynamics, Evolution and Human Consciousness. A claim is defended concerning the universal representation of an item’s essence in categorical terms. As an essential example, relational structures of living organisms are well represented by applying the important categorical concept of natural transformations to biomolecular reactions and relational structures that (...) emerge from the latter in living systems. Thus, several relational theories of living systems can be represented by natural transformations of organismic, relational structures. The ascent of man and other living organisms through adaptation, is viewed in novel categorical terms, such as variable biogroupoid representations of evolving species. Such precise but flexible evolutionary concepts will allow the further development of the unifying theme of local-to-global approaches to highly complex systems in order to represent novel patterns of relations that emerge in super- and ultra-complex systems in terms of compositions of local procedures. Solutions to such local-to-global problems in highly complex systems with ‘broken symmetry’ might be possible to be reached with the help of higher homotopy theorems in algebraic topology such as the generalized van Kampen theorems (HHvKT). Categories of many-valued, Łukasiewicz-Moisil (LM) logic algebras provide useful concepts for representing the intrinsic dynamic ‘asymmetry’ of genetic networks in organismic development and evolution, as well as to derive novel results for (non-commutative) Quantum Logics. Furthermore, as recently pointed out by Baianu and Poli (Theory and applications of ontology, vol 1. Springer, Berlin, in press), LM-logic algebras may also provide the appropriate framework for future developments of the ontological theory of levels with its complex/entangled/intertwined ramifications in psychology, sociology and ecology. As shown in the preceding two papers in this issue, a paradigm shift towards non-commutative, or non-Abelian, theories of highly complex dynamics—which is presently unfolding in physics, mathematics, life and cognitive sciences—may be implemented through realizations of higher dimensional algebras in neurosciences and psychology, as well as in human genomics, bioinformatics and interactomics. (shrink)

New concepts are constantly being introduced into our thinking. _Conceptual Systems_ explores how these new concepts are entered into our systems along with sufficient continuity with older ideas to ensure understanding. The encyclopedic breadth of this text highlights the many different aspects and disciplines that together present an insightful view into the various theories of concepts. Harold Brown, a reputable author in the philosophy of science examines several historically influential theories of concepts as well as presenting a clear view (...) on the general theory of conceptual change. Case studies discuss examples of conceptual change in the history of physics including the move in seventeenth century physics from Galileo to Descates to Newton; and the conceptual framework of the 'standard model' in the late twentieth century high-energy physics. The key central themes in the philosophy of science that are explored in detail in this enormous book make it an essential read for academics in this field. (shrink)

Recent work in the philosophy of science has taken a decidedly historicist turn. A number of writers have rejected the traditional thesis that science develops through the accumulation of firmly established truths, maintaining instead that scientific research is founded on beliefs which are presupposed without having been proven. Since these presuppositions are not established truths they are subject to revision, and a change in the presuppositions of a discipline results in a fundamental restructuring of that discipline, i.e., a scientific revolution. (...) There are a number of versions of this general approach currently under debate, and there is considerable disagreement on how the various versions are to be interpreted. The central issue of this debate is the nature of scientific revolutions and it will be useful for our purposes to establish a point of reference by sketching an extreme view of scientific revolutions, a view which is often attributed to Kuhn and Feyerabend. (shrink)

New concepts are constantly being introduced into our thinking. _Conceptual Systems_ explores how these new concepts are entered into our systems along with sufficient continuity with older ideas to ensure understanding. The encyclopedic breadth of this text highlights the many different aspects and disciplines that together present an insightful view into the various theories of concepts. Harold Brown, a reputable author in the philosophy of science examines several historically influential theories of concepts as well as presenting a clear view (...) on the general theory of conceptual change. Case studies discuss examples of conceptual change in the history of physics including the move in seventeenth century physics from Galileo to Descates to Newton; and the conceptual framework of the 'standard model' in the late twentieth century high-energy physics. The key central themes in the philosophy of science that are explored in detail in this enormous book make it an essential read for academics in this field. (shrink)

A number of philosophers have argued that a naturalized epistemology cannot be normative, and thus that the norms that govern science cannot themselves be established empirically. Three arguments for this conclusion are here developed and then responded to on behalf of naturalized epistemology. The response is developed in three stages. First, if we view human knowers as part of the natural world, then the attempt to establish epistemic norms that are immune to scientific evaluation faces difficulties that are at least (...) as severe as the purported difficulties for naturalized epistemology. Second, some examples of the ways in which norms are proposed and evaluated in the course of scientific research are considered and it is concluded that science has no need for trans?scientific norms. Finally, the three arguments introduced at the outset have no force when they are viewed in the light of the preceding discussion. (shrink)

This paper argues that when used judiciously Bayes's law has a role to play in the evaluation of scientific hypotheses. Several examples are presented in which a rational response to evidence requires a judgement whether to apply Bayes's law or whether, for example, to redistribute prior probabilities. The paper concludes that reflection on Bayes's law illustrates how an adequate account of the rational evaluation of hypotheses requires an account of judgement--a point which several philosophers have noted despite few attempts to (...) develop an adequate theory of judgement. (shrink)

A major theme of recent philosophy of science has been the rejection of the empiricist thesis that, with the exception of terms which play a purely formal role, the language of science derives its meaning from some, possibly quite indirect, correlation with experience. The alternative that has been proposed is that meaning is internal to each conceptual system, that terms derive their meaning from the role they play in a language, and that something akin to "meaning" flows from conceptual framework (...) to experience. Much contemporary debate on the nature of conceptual change is a direct outgrowth of this holistic view of concepts, and much of the inconclusiveness of that debate derives from the lack of any clear understanding of what a conceptual system is, or of how conceptual systems confer meaning on their terms. (shrink)